Information for 5-AGATTAACCAATC (Motif 5)

T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C
Reverse Opposite:
A C T G C T G A G A C T A C G T A C T G A C T G G A C T A C G T C G T A T G C A A C G T T G A C A C G T
p-value:1e-23
log p-value:-5.380e+01
Information Content per bp:1.744
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 29.9bp
Average Position of motif in Background69.6 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGATTAACCAATC-
--ACTAGCCAATCA
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGATTAACCAATC--
AAATGGACCAATCAG
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AGATTAACCAATC--
-----AGCCAATCGG
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGATTAACCAATC--------
---TGGACCAATCAGCACTCT
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.64
Offset:7
Orientation:forward strand
Alignment:AGATTAACCAATC--
-------CCAATCAA
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGATTAACCAATC-------
---CGACCCAATCAACGGTG
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGATTAACCAATC----
-------CAAATCACTG
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGATTAACCAATC
--GTTAACTAGN-
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGATTAACCAATC
--AATAAACAATN
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGATTAACCAATC
-----TGCCAA--
 T G C A A C T G G T C A A C G T A C G T T G C A C T G A A G T C A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T