Information for 14-CGCGCCGCTCCTTTAG (Motif 24)

A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 22.7bp
Average Position of motif in Background33.7 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCTCCTTTAG
GGCCCCGCCCCC----
 A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCGCCGCTCCTTTAG
NNGGCCACGCCTTTN-
 A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGCTCCTTTAG
AGCGCGCC----------
 A C G T A C G T A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGCTCCTTTAG
TCACCCCGCCCCAAATT
 A C G T A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCCGCTCCTTTAG
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCTCCTTTAG
ATCCCCGCCCCTAAAA
 A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGCTCCTTTAG
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCCGCTCCTTTAG
NAGCCCCGCCCCCN---
 A C G T A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGCTCCTTTAG
-GCTCCGCCCMCY---
 A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCGCCGCTCCTTTAG
------GCTCCG----
 A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T