Information for 19-TTKCATGCTGRTT (Motif 23)

C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T
Reverse Opposite:
G T C A C G T A G A C T T A G C C G T A C T A G T A G C G T C A C G A T C T A G G T A C G T C A C G T A
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.672
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif298.6
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets55.7 +/- 26.7bp
Average Position of motif in Background51.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTKCATGCTGRTT--
TCNCCTGCTGNGNNN
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTKCATGCTGRTT
---CCTGCTGAGH
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTKCATGCTGRTT--
TNTCCTGCTGTGNNG
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTKCATGCTGRTT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTKCATGCTGRTT--
NNTCCTGCTGTGNNN
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SPIC/MA0687.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTKCATGCTGRTT--
-TACTTCCTCTTTTN
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T A C G T
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTKCATGCTGRTT-
CTTTCANTATGACTV
 A C G T C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTKCATGCTGRTT
--ACATCCTGNT-
 C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTKCATGCTGRTT
ATTGCATCAT----
 A C G T C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTKCATGCTGRTT
ATTGCATCAK----
 A C G T C G A T A C G T C A T G A G T C G C T A A C G T A T C G A G T C G A C T A T C G C T G A G A C T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T