Information for 3-GTCABCTGTCGCYAGG (Motif 2)

T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
Reverse Opposite:
T A G C T G A C A G C T C T A G A C T G G T A C C T A G T G C A A G T C G C T A C T A G T G A C A C G T A T C G C G T A A G T C
p-value:1e-41
log p-value:-9.587e+01
Information Content per bp:1.691
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.9 +/- 16.0bp
Average Position of motif in Background54.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:GTCABCTGTCGCYAGG-
-----CTGTTGCTAGGS
 T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCABCTGTCGCYAGG
GTCWGCTGTYYCTCT-
 T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCABCTGTCGCYAGG
TGCAGCTGTCCCT---
 T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCABCTGTCGCYAGG
--CAGCTGTT------
 T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCABCTGTCGCYAGG
CNGACACCTGTTCNNN--
 A C G T A C G T T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCABCTGTCGCYAGG
NNGCAGCTGTT------
 A C G T T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCABCTGTCGCYAGG
GGTCACGTGGC------
 A C G T T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCABCTGTCGCYAGG
NNGCAGCTGTC------
 A C G T T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCABCTGTCGCYAGG
GGTCACATGAC------
 A C G T T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCABCTGTCGCYAGG
ATCAGCTGTT------
 T C A G A C G T A T G C T C G A A C T G G A T C C G A T A C T G A C G T A G T C C A T G A G T C G A T C C T G A A C T G A T C G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T