Information for 10-GTGTCCTGTAGTTTCT (Motif 16)

A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G G T C A G T C A C T G A A G T C A C G T C G T A A T G C C G T A A C T G A C T G C G T A A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 23.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTGTAGTTTCT-
-TGACCTNTAGTAACCC
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T A C G T
A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGTCCTGTAGTTTCT----
-TGACCTAAAGTAACCTCTG
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGTCCTGTAGTTTCT
----ACTTTCGTTTCT
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTGTCCTGTAGTTTCT
-----CTGTGGTTTN-
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGTCCTGTAGTTTCT
GTGACCTT--------
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGTCCTGTAGTTTCT
----GCTGTGGTTT--
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTGTAGTTTCT
-TGACCTYA-------
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTGTCCTGTAGTTTCT
---GTCTGTGGTTT--
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCCTGTAGTTTCT
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTGTCCTGTAGTTTCT
----NNTGTGGTTT--
 A C T G C G A T A C T G C G A T A G T C A G T C A C G T A T C G A C G T C G T A A C T G A G C T A C G T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T