Information for 8-GGTAACTGVAGGC (Motif 8)

A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G A T A G C T A G T C C G T A A C T G A C G T A C G T C G T A A G T C A G T C
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 18.6bp
Average Position of motif in Background58.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGVAGGC--
GGGTTACTANAGGTCA
 A C G T A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTAACTGVAGGC
-GAAAGTGAAAGT
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGTAACTGVAGGC--
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTAACTGVAGGC
GGGAATTGTAGT-
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTAACTGVAGGC
-GAAASYGAAASY
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTAACTGVAGGC
-GWAAYHTGAKMC
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTAACTGVAGGC
-NHAACBGYYV--
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGTAACTGVAGGC
-GAAACTGAAACT
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTAACTGVAGGC-----
GGAAAGCGAAACCAAAAC
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGTAACTGVAGGC
-GRAASTGAAAST
 A C T G A C T G C G A T G T C A G T C A A G T C A C G T A C T G T C A G C G T A C T A G A C T G A G T C
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T