Information for 17-SGGAAMCTGCAGG (Motif 17)

T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G A T A G T C A G T C A T C G
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.8 +/- 28.6bp
Average Position of motif in Background38.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SGGAAMCTGCAGG
SNGCACCTGCHS-
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:SGGAAMCTGCAGG---
----CACAGCAGGGGG
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SGGAAMCTGCAGG
-GGGAATTGTAGT
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SGGAAMCTGCAGG
AGGAAACAGCTG-
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:SGGAAMCTGCAGG
---DCTCAGCAGG
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SGGAAMCTGCAGG-----
---DCHCAGCAGGRGGCC
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--SGGAAMCTGCAGG
NNTGGAAANN-----
 A C G T A C G T T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SGGAAMCTGCAGG-
--GAAAGTGAAAGT
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SGGAAMCTGCAGG
-GGAAATTCCC--
 T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--SGGAAMCTGCAGG
AATGGAAAAT-----
 A C G T A C G T T A G C A C T G A C T G C G T A C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G T A C G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T