Information for 12-ACCTCAGTCTGAC (Motif 13)

T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C
Reverse Opposite:
A T C G A C G T A T G C C G T A A C T G C G T A G T A C A C G T A C T G C G T A A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 22.3bp
Average Position of motif in Background67.1 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACCTCAGTCTGAC--
BTGACCTCTNNHTGACCY
 A C G T A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCAGTCTGAC--
TGACCTTTANTTGACCT
 A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACCTCAGTCTGAC-
GCAACCTCATTATNNNN
 A C G T A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCAGTCTGAC--
TGACCTTTGCATGACCT
 A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCTCAGTCTGAC-
NAGGTCACNNTGACC
 A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

RARA::RXRA/MA0159.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCAGTCTGAC--
TGACCTCTCNNTGACCT
 A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACCTCAGTCTGAC
----TWGTCTGV-
 T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACCTCAGTCTGAC
----CTGTCTGG-
 T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACCTCAGTCTGAC---
NAGTTTCABTHTGACTNW
 A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACCTCAGTCTGAC----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T T C G A A G T C A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T A T C G C G T A A T G C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C