Information for 11-AGTGTGGCTGAGA (Motif 12)

C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A G T C C G T A A C T G A G T C A G T C C G T A A G T C C G T A A T G C A C G T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 28.3bp
Average Position of motif in Background54.8 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTGGCTGAGA
TGGGTGTGGC-----
 A C G T A C G T C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTGTGGCTGAGA
NTGGGTGTGGCC----
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGGCTGAGA
NNHTGTGGTTWN--
 A C G T C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGGCTGAGA
GTCTGTGGTTT---
 A C G T C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTGTGGCTGAGA
---TWGTCTGV--
 C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTGTGGCTGAGA-----
---GNNACCGAGAATNNN
 C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGTGTGGCTGAGA
TGCGTGGGYG---
 C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGTGTGGCTGAGA
NNTGTGGTTT---
 C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTGTGGCTGAGA-----
---NNNACCGAGAGTNNN
 C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGGCTGAGA
CAGTGTGGTCGC--
 A C G T C G T A A T C G A C G T A C T G A C G T A C T G C T A G A G T C C G A T A C T G C G T A A C T G C G T A
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T