Information for 12-TGGCAGTGCGGTTGCT (Motif 21)

A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C T G A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 19.3bp
Average Position of motif in Background26.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT
-----TTGCGGTTT--
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGTGCGGTTGCT
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT
---CAGTGTGGTCGC-
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT
----TTTGCGGTTT--
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT------
-------NCCGTTGCTANGNGN
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT------
-------NNCGTTGCTATGGNN
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT----
--------CTGTTGCTAGGS
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTGCGGTTGCT
CTTGGCAA----------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT---
----GGNGCGNCTGTTNNN
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGCAGTGCGGTTGCT----------
---NTNNNNNGTTGCTANGGNNCANA
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A