Information for 11-GCTGAACACA (Motif 20)

C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A
Reverse Opposite:
A C G T A T C G C G A T A T C G C G A T A C G T A G T C C G T A A T C G G T A C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.836
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif135.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets54.9 +/- 21.3bp
Average Position of motif in Background47.8 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGAACACA-----
AGCGGCACACACGCAA
 A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGAACACA-----
CGAAGCACACAAAATA
 A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTGAACACA-
-NAAACCACAG
 C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTGAACACA---
-NWAACCACADNN
 C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTGAACACA---
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGAACACA--
--AAACCACAGC
 C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTGAACACA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTGAACACA----
AAAGTAAACAAAAATT
 A C G T A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAACACA----
NNTTTGCACACGGCCC
 A C G T A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAACACA-
NDGTAAACARRN
 A C G T C A T G A T G C C G A T A C T G G T C A C G T A A T G C G C T A T A G C G T C A A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A