Information for 9-GCGGCCAGGGCCCTCT (Motif 14)

A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
G T C A C T A G C G T A C T A G C T A G C T A G A G T C A T G C T G A C C G A T A C T G A C T G A G T C G T A C A C T G G T A C
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 18.4bp
Average Position of motif in Background41.6 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGGCCAGGGCCCTCT-
--TGCCTGCGYCMCCTT
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCGGCCAGGGCCCTCT
CAGGCCNNGGCCNN--
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGGCCAGGGCCCTCT
-AGGCCTAG-------
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCGGCCAGGGCCCTCT
-AGGTCANTGACCTN-
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCGGCCAGGGCCCTCT-------
---GCCTCCTCCMTCWGACTGKS
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GCGGCCAGGGCCCTCT
-AGGCCTNG-------
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCAGGGCCCTCT
NGTTGCCATGGCAA---
 A C G T A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCGGCCAGGGCCCTCT
--TGCCAA--------
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCGGCCAGGGCCCTCT
CGTGCCAAG-------
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GCGGCCAGGGCCCTCT---
-ATGCCACGCCCCTTTTTG
 A C T G G T A C C A T G A C T G G T A C A G T C C G T A A C T G A T C G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G