Information for 8-GRTGAAACCTGAA (Motif 8)

C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
Reverse Opposite:
G C A T C A G T T A G C G C T A T C A G A T C G G A C T C A G T A G C T G T A C G T C A G A C T G T A C
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.608
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.41%
Number of Background Sequences with motif642.3
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets52.0 +/- 27.2bp
Average Position of motif in Background50.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GRTGAAACCTGAA--
---GWAAYHTGABMC
 C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GRTGAAACCTGAA--
---GWAAYHTGAKMC
 C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRTGAAACCTGAA
GGTTAAACATTAA
 C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRTGAAACCTGAA
ACTGAAACCA---
 C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GRTGAAACCTGAA
--TGACACCT---
 C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GRTGAAACCTGAA
GGGGTCAAAGGTCA-
 A C G T A C G T C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GRTGAAACCTGAA
GGGGTCAAAGGTCA-
 A C G T A C G T C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GRTGAAACCTGAA
ATGATGCAAT-----
 A C G T A C G T C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GRTGAAACCTGAA
GGGGTCAAAGGTCA-
 A C G T A C G T C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GRTGAAACCTGAA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T C A T G C T G A A C G T C A T G C T G A G T C A C T G A T A G C A G T C C G A T A T C G G T C A C G T A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C