p-value: | 1e-32 |
log p-value: | -7.494e+01 |
Information Content per bp: | 1.671 |
Number of Target Sequences with motif | 103.0 |
Percentage of Target Sequences with motif | 12.65% |
Number of Background Sequences with motif | 1437.9 |
Percentage of Background Sequences with motif | 3.07% |
Average Position of motif in Targets | 52.9 +/- 24.7bp |
Average Position of motif in Background | 50.4 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0003.1_REL_class/Jaspar
Match Rank: | 1 |
Score: | 0.98 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAAATCCCC GGAAATCCCC |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 2 |
Score: | 0.95 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGAAATCCCC- GGGAAATCCCCN |
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RELA/MA0107.1/Jaspar
Match Rank: | 3 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAAATCCCC GGAAATTCCC |
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REL/MA0101.1/Jaspar
Match Rank: | 4 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAAATCCCC GGAAANCCCC |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 5 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGAAATCCCC GGAAATTCCC |
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NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGAAATCCCC GGGGGAATCCCC |
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NFKB2/MA0778.1/Jaspar
Match Rank: | 7 |
Score: | 0.81 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGAAATCCCC- AGGGGAATCCCCT |
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NFKB1/MA0105.4/Jaspar
Match Rank: | 8 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGAAATCCCC- AGGGGAATCCCCT |
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NFATC1/MA0624.1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGAAATCCCC NNTGGAAANN--- |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGAAATCCCC-- GNNAGCTAATCCCCCN |
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