Information for 7-CTCCCACGCA (Motif 8)

A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
Reverse Opposite:
C G A T A C T G A T G C T C A G C G A T A C T G T A C G A T C G T C G A T A C G
p-value:1e-13
log p-value:-3.129e+01
Information Content per bp:1.688
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif892.8
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets55.2 +/- 25.0bp
Average Position of motif in Background49.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CTCCCACGCA
CRCCCACGCA
 A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

EGR4/MA0733.1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---CTCCCACGCA---
TTACGCCCACGCATTT
 A C G T A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CTCCCACGCA
ACGCCCACGCA
 A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---CTCCCACGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCACGCA
YCCGCCCACGCN
 A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CTCCCACGCA--
TCCGCCCCCGCATT
 A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:CTCCCACGCA
----CACGCA
 A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CTCCCACGCA
CCCCCGCCCCCGCC
 A C G T A C G T A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTCCCACGCA-
-TBGCACGCAA
 A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCACGCA---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A T G C A G C T T A G C A G T C A G T C G C T A A G T C T A C G A G T C G C T A A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A