Information for 5-CCACYAGGGGGCR (Motif 6)

A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A
Reverse Opposite:
A G C T A C T G A G T C A G T C G T A C G A T C A G T C C G A T T C A G A T C G G A C T C T A G A T C G
p-value:1e-16
log p-value:-3.870e+01
Information Content per bp:1.752
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif111.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets55.8 +/- 24.9bp
Average Position of motif in Background44.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCACYAGGGGGCR------
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CCACYAGGGGGCR---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CCACYAGGGGGCR----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCACYAGGGGGCR-----
-NNNAAGGGGGCGGGNNN
 A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCACYAGGGGGCR
-TGTCAGGGGGCG
 A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGGGGCR
NCNCAGCGGGGGGTC
 A C G T A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGGGGCR
DCHCAGCAGGRGGCC
 A C G T A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CCACYAGGGGGCR-
-----TNNGGGCAG
 A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACYAGGGGGCR
CACCCCCGGGGGGG-
 A C G T A C G T A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCACYAGGGGGCR-
-----NGTGGGCAT
 A T G C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T