Motif 21

Information for 16-CCCCCGCGCGCAG (Motif 21)

Reverse Opposite:

p-value:	1e-9
log p-value:	-2.165e+01
Information Content per bp:	1.903
Number of Target Sequences with motif	5.0
Percentage of Target Sequences with motif	0.62%
Number of Background Sequences with motif	2.6
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	62.2 +/- 26.0bp
Average Position of motif in Background	55.1 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.20
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:	1
Score:	0.66
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCCGCGCGCAG GACCCCCCGCGAAG

PB0010.1_Egr1_1/Jaspar

Match Rank:	2
Score:	0.64
Offset:	-4
Orientation:	forward strand
Alignment:	----CCCCCGCGCGCAG TCCGCCCCCGCATT---

ZNF740/MA0753.1/Jaspar

Match Rank:	3
Score:	0.62
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCCGCGCGCAG CCCCCCCCAC----

PB0204.1_Zfp740_2/Jaspar

Match Rank:	4
Score:	0.61
Offset:	-6
Orientation:	forward strand
Alignment:	------CCCCCGCGCGCAG AAATTCCCCCCGGAAGT--

PB0102.1_Zic2_1/Jaspar

Match Rank:	5
Score:	0.60
Offset:	-3
Orientation:	reverse strand
Alignment:	---CCCCCGCGCGCAG ACCCCCCCGGGGGGN-

PB0103.1_Zic3_1/Jaspar

Match Rank:	6
Score:	0.59
Offset:	-3
Orientation:	reverse strand
Alignment:	---CCCCCGCGCGCAG NCCCCCCCGGGGGGN-

EGR1/MA0162.2/Jaspar

Match Rank:	7
Score:	0.59
Offset:	-6
Orientation:	forward strand
Alignment:	------CCCCCGCGCGCAG CCCCCGCCCCCGCC-----

SP1/MA0079.3/Jaspar

Match Rank:	8
Score:	0.58
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCGCGCAG GCCCCGCCCCC--

GLIS3/MA0737.1/Jaspar

Match Rank:	9
Score:	0.58
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCCGCGCGCAG GACCCCCCACGAAG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:	10
Score:	0.58
Offset:	0
Orientation:	reverse strand
Alignment:	CCCCCGCGCGCAG CRCCCACGCA---