Information for 12-VCCCAACAGGGAG (Motif 16)

T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G
Reverse Opposite:
A T G C A G C T T A G C T G A C A G T C A C G T A C T G C G A T A C G T C T A G C T A G C T A G A T G C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 24.0bp
Average Position of motif in Background43.3 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:VCCCAACAGGGAG
-CACAGCAGGGGG
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:VCCCAACAGGGAG--
DCHCAGCAGGRGGCC
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:VCCCAACAGGGAG-
----AACAGGAAGT
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:VCCCAACAGGGAG
----CACAGN---
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--VCCCAACAGGGAG
CCACACAGCAGGAGA
 A C G T A C G T T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--VCCCAACAGGGAG
CCACACAGCAGGAGA
 A C G T A C G T T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:VCCCAACAGGGAG--
-----ACAGGAAGTG
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VCCCAACAGGGAG--
-CACAGCGGGGGGTC
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:VCCCAACAGGGAG--
NCNCAGCGGGGGGTC
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:VCCCAACAGGGAG-
----NACAGGAAAT
 T A C G A G T C A G T C A G T C G T C A C G T A A G T C C G T A A C T G A C T G A T C G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T