Information for 1-HAACCRCARA (Motif 1)

G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
Reverse Opposite:
A G C T G A C T A C G T A C T G A G T C A C T G A C T G A C G T G C A T C A G T
p-value:1e-37
log p-value:-8.589e+01
Information Content per bp:1.747
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif10.32%
Number of Background Sequences with motif796.1
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets44.5 +/- 22.7bp
Average Position of motif in Background51.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:HAACCRCARA
AAACCGCAAA
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:HAACCRCARA
AAACCGCAA-
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:HAACCRCARA
AAACCACANN
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-HAACCRCARA
NAAACCACAG-
 A C G T G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:HAACCRCARA-
AAACCACAGAN
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:HAACCRCARA
AAACCACAGC
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-HAACCRCARA-
NWAACCACADNN
 A C G T G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:HAACCRCARA
-AACCGANA-
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:HAACCRCARA
TACCCGCATN
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:HAACCRCARA--
-AACCGGAAATA
 G T C A C G T A C G T A A G T C A G T C C T A G A G T C C G T A C T G A T C G A A C G T A C G T
A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A