Information for 4-CTGTGGTTAA (Motif 4)

A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
Reverse Opposite:
G C A T C G A T T C G A T G C A G A T C G T A C G C T A T A G C G C T A T C A G
p-value:1e-25
log p-value:-5.864e+01
Information Content per bp:1.537
Number of Target Sequences with motif255.0
Percentage of Target Sequences with motif31.25%
Number of Background Sequences with motif7661.9
Percentage of Background Sequences with motif16.29%
Average Position of motif in Targets49.8 +/- 26.0bp
Average Position of motif in Background49.9 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTTAA
GCTGTGGTTT-
 A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTTAA
CTGTGGTTTN
 A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGTTAA
GTCTGTGGTTT-
 A C G T A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTTAA
NNTGTGGTTT-
 A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTTAA
NNHTGTGGTTWN
 A C G T A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTTAA
TTGCGGTTT-
 A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTTAA
TTTGCGGTTT-
 A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTTAA
TGCTGTGATTT-
 A C G T A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTTAA
GCTGTG-----
 A C G T A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGTGGTTAA
--GTGGAT--
 A G T C C G A T A T C G C G A T C A T G C T A G A C G T A G C T C G T A C G T A
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T