Information for 14-AGTCTAACAGADT (Motif 19)

C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
Reverse Opposite:
C T G A G A C T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A G T A C A C G T
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.882
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 12.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGTCTAACAGADT
TGTCTGDCACCT-
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGTCTAACAGADT
-----CACAGN--
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAACAGADT
CTGTCTGTCACCT-
 A C G T C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTCTAACAGADT
---TTMACACCTT
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAACAGADT---
GATATTGACAGCTGCGT
 A C G T C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGTCTAACAGADT
---TTGACAG---
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGTCTAACAGADT
---TTGACAGC--
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGTCTAACAGADT---
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGTCTAACAGADT--
-----AACAGATGGT
 C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAACAGADT-
AAAAATAACAAACGG
 A C G T C G T A A C T G A C G T A G T C A C G T T G C A C G T A A G T C C G T A A C T G C G T A C G T A G A C T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G