Information for 13-GTGAATGAAATGA (Motif 18)

A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 22.3bp
Average Position of motif in Background47.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGAATGAAATGA--
TTGAATGAAATTCGA
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGAATGAAATGA
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGAATGAAATGA
NTGATTGACAGN-
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGAATGAAATGA
BTGABTGACAGS-
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGAATGAAATGA
ARGAGGMCAAAATGW
 A C G T A C G T A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGAATGAAATGA-
--AGATGCAATCCC
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGAATGAAATGA
---NCTGGAATGC
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTGAATGAAATGA
NTTNTATGAATGTGNNC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTGAATGAAATGA
-----TGGAATGT
 A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGAATGAAATGA
ATTTGCATACAATGG
 A C G T A C G T A C T G A C G T A C T G G T C A G T C A A C G T A C T G G T C A C G T A C G T A A C G T A C T G C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G