Information for 12-RYTTAGTGMAGMT (Motif 13)

C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C T G A G T C C G T A A T G C A C G T C G T A C G T A C T A G A G C T
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 29.9bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RYTTAGTGMAGMT
-TTAAGTGC----
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---RYTTAGTGMAGMT-
NAAANTTATTGAANCAN
 A C G T A C G T A C G T C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RYTTAGTGMAGMT
-TTRAGTGSYK--
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RYTTAGTGMAGMT
-TTAAGTGGN---
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:RYTTAGTGMAGMT
------NGAAGC-
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RYTTAGTGMAGMT
NNAATTAGTCACGGT
 A C G T A C G T C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RYTTAGTGMAGMT
TAATTCAATGAAGTG
 A C G T A C G T C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PH0039.1_Mnx1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----RYTTAGTGMAGMT
GTACTAATTAGTGGCG--
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RYTTAGTGMAGMT
-ACTAGTTAAC--
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RYTTAGTGMAGMT
-TTAAGTGGT---
 C T G A A G T C A C G T C G A T C G T A A T C G C G A T A C T G G T A C C G T A A C T G G T A C A C G T
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T