Information for 9-AGGGCCACAAAGA (Motif 9)

C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C T G A C T G A T G C A T G C A T G C A C G T
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.834
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.7 +/- 23.7bp
Average Position of motif in Background46.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGCCACAAAGA
NWAACCACADNN-
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCACAAAGA-
AAGCCCCCCAAAAAT
 A C G T C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AGGGCCACAAAGA
------ACAAAG-
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGGCCACAAAGA
-AAACCACAGAN-
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGGCCACAAAGA
---VRRACAAWGG
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGGGCCACAAAGA-----
------ACAAAGGNBCCT
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGCCACAAAGA
-RGGGCACTAACY
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGGCCACAAAGA
---GGAACAAAGR
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGCCACAAAGA---
AAACAGACAAAGGAAT
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGCCACAAAGA----
AGAAGAACAAAGGACTA
 C G T A A T C G A T C G A T C G A G T C A G T C G T C A A G T C C G T A C G T A C G T A A T C G G T C A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A