Information for 4-GGGRAWTTCCCCV (Motif 5)

C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
Reverse Opposite:
A T C G C A T G A C T G A C T G C T A G T C G A T G C A G C T A A C G T A G T C A G T C G A T C G T A C
p-value:1e-30
log p-value:-7.022e+01
Information Content per bp:1.619
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.50%
Number of Background Sequences with motif675.2
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets48.6 +/- 25.6bp
Average Position of motif in Background46.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GGGRAWTTCCCCV
NGGGGATTTCCC--
 A C G T C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGGRAWTTCCCCV
AGGGGATTCCCCT-
 A C G T C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GGGRAWTTCCCCV
GGGGATTCCCCC-
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GGGRAWTTCCCCV
-GGAAATCCCC--
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GGGRAWTTCCCCV
-GGAAATTCCC--
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGGRAWTTCCCCV
-GGAAATTCCC--
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGRAWTTCCCCV
GGGGATTTCC---
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGRAWTTCCCCV
AGGGGATTCCCCT-
 A C G T C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GGGRAWTTCCCCV
-------TCCCCA
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGGRAWTTCCCCV-
----HTTTCCCASG
 C A T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C G T A C T G A C G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G