Information for 12-GAAAGACCTGTGG (Motif 11)

A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C G T A C T A G A C T G C G A T A G T C A G C T A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 20.5bp
Average Position of motif in Background20.3 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAAAGACCTGTGG----
-----NNHTGTGGTTWN
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAAAGACCTGTGG---
--NTGCCCANNGGTNA
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAAGACCTGTGG---
-ANCCACCTGTTGCNC
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAAAGACCTGTGG---
-----GTCTGTGGTTT
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAAAGACCTGTGG---
------GCTGTGGTTT
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GAAAGACCTGTGG----
-------CTGTGGTTTN
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GAAAGACCTGTGG--
---------GTGGAT
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAAAGACCTGTGG---
---CCACCTGTTGCAT
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAAGACCTGTGG
AGGAAACAGCTG---
 A C G T A C G T A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAAAGACCTGTGG----
-AANTTCAAGTGGCTTN
 A C T G C G T A C G T A C T G A A C T G C G T A A G T C A G T C C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A