Information for 1-RRAAGTGAAACTGADA (Motif 1)

T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
Reverse Opposite:
A G C T G A C T C G A T G A T C C G T A A T C G A C G T A C G T A G C T A G T C G C T A A T G C G C A T A G C T A G T C A G T C
p-value:1e-54
log p-value:-1.253e+02
Information Content per bp:1.555
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif14.90%
Number of Background Sequences with motif1173.0
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets47.4 +/- 24.7bp
Average Position of motif in Background49.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RRAAGTGAAACTGADA
GRAASTGAAAST----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:forward strand
Alignment:RRAAGTGAAACTGADA
GGAAGTGAAAST----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:RRAAGTGAAACTGADA
GAAAMTGAAACT----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:RRAAGTGAAACTGADA
GAAAGTGAAAGT----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:RRAAGTGAAACTGADA
GAAACTGAAACT----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-RRAAGTGAAACTGADA
CGGAAGTGAAAC-----
 A C G T T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-RRAAGTGAAACTGADA
AGAAAGTGAAAGTGA--
 A C G T T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-RRAAGTGAAACTGADA
GGAAANTGAAACTNA--
 A C G T T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:RRAAGTGAAACTGADA
GAAAGTGAAAGT----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.84
Offset:0
Orientation:forward strand
Alignment:RRAAGTGAAACTGADA
GAAASYGAAASY----
 T C A G C T A G T C G A C G T A T A C G C G A T A C T G C T G A T G C A C G T A T A G C G C A T C T A G G C T A C T G A T C G A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T