Information for 4-GGAAGTTCCA (Motif 11)

C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
Reverse Opposite:
C G A T C T A G C T A G T G C A T G C A G A T C A G C T A G C T A T G C G T A C
p-value:1e-3
log p-value:-9.128e+00
Information Content per bp:1.554
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif32.81%
Number of Background Sequences with motif6437.7
Percentage of Background Sequences with motif14.02%
Average Position of motif in Targets42.5 +/- 24.4bp
Average Position of motif in Background49.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGTTCCA
GGGAATTTCC-
 A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGAAGTTCCA
GGGAATTTCC-
 A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGAAGTTCCA
GGGGATTTCC-
 A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGAAGTTCCA
NGGGGATTTCCC
 A C G T A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGAAGTTCCA
GGGGATTTCC-
 A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GGAAGTTCCA
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAAGTTCCA--
--ATTTTCCATT
 C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGAAGTTCCA
AVCAGGAAGT----
 A C G T A C G T A C G T A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAAGTTCCA
AGCGGAAGTG---
 A C G T A C G T A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGAAGTTCCA
ACCCGGAAGTA---
 A C G T A C G T A C G T A C G T C A T G T A C G T C G A C T G A C T A G A C G T A C G T G A T C G A T C G C T A
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T