Information for 3-CTCACTADCTGTA (Motif 9)

A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
Reverse Opposite:
A C G T C G T A A G T C C G T A C T A G G A C T A C G T C G T A A C T G A C G T A T C G C T G A A C T G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.5 +/- 33.6bp
Average Position of motif in Background44.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CTCACTADCTGTA
GCAACCTCATTATNNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCACTADCTGTA
--CACTTCCTGT-
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTCACTADCTGTA---
-GVACAGNMTGTYCTB
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A A C G T A C G T A C G T
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTCACTADCTGTA
NNNACCTCATTATCNTN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCACTADCTGTA-----
--AACTAGCTGTCAATAC
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTCACTADCTGTA
---ACCATCTGTT
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTCACTADCTGTA---
-GRACAGWMTGTYCTB
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A A C G T A C G T A C G T
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTCACTADCTGTA
TGCTGACTCA-----
 A C G T A C G T A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCACTADCTGTA--
ACCACTCTCGGTCAC
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTCACTADCTGTA
---ACTTCCTGTT
 A G T C A G C T A T G C C G T A A G T C C G A T G T C A C G T A A G T C C G A T A C T G A C G T G T C A
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T