Information for 3-CTGCCMCAGG (Motif 8)

A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G
Reverse Opposite:
T A G C G T A C C G A T A C T G C A G T A C T G A C T G G T A C G T C A C T A G
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.760
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif10.85%
Number of Background Sequences with motif1322.7
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets45.2 +/- 26.6bp
Average Position of motif in Background49.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTGCCMCAGG--
-AGCCTCAGGCA
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTGCCMCAGG--
-CGCCTCAGGCA
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTGCCMCAGG--
-AGCCTCAGGCA
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMCAGG----
NTNGCCTCAGGCNNN
 A C G T A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTGCCMCAGG----
--GCCTCAGGGCAT
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTGCCMCAGG----
--SCCTSAGGSCAW
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTGCCMCAGG
----CACAGN
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMCAGG----
ANTGCCTGAGGCAAN
 A C G T A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMCAGG----
NTCGCCTCAGGCAAT
 A C G T A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGCCMCAGG
-TGACTCA--
 A G T C C A G T A C T G G T A C A G T C G T C A G T A C C G T A A C T G A T C G
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T