Information for 1-GGGGACACTC (Motif 5)

A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
Reverse Opposite:
A C T G C G T A A C T G A G C T A T C G A G C T A T G C A G T C A G T C A G T C
p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.842
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif189.3
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets38.2 +/- 25.8bp
Average Position of motif in Background47.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGGACACTC
TGGGGA-----
 A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGGACACTC--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGACACTC--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGGACACTC--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGGACACTC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGGACACTC
CCAGGAACAG--
 A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGGACACTC
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGGACACTC
AGRGGTCA---
 A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GGGGACACTC
TGCGCATAGGGGAGGAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGGACACTC
NCGCGGACGTTG
 A C G T A C G T A C T G A C T G A C T G A T C G T C G A A T G C T C G A T G A C A C G T T G A C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G