Information for 2-CACTGTGCCCAGG (Motif 4)

A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C C G A T A C T G A C T G A T C G A G T C G T C A A T G C C T G A A T C G A C G T A C T G
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.813
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif148.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets38.0 +/- 19.1bp
Average Position of motif in Background46.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CACTGTGCCCAGG--
-----TGCCCAGNHW
 A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACTGTGCCCAGG
----ATGCCCACC
 A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACTGTGCCCAGG
NAGGTCACNNTGACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACTGTGCCCAGG----
-NNTTTGCACACGGCCC
 A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACTGTGCCCAGG
TACCCACAATGCATTG-
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACTGTGCCCAGG
TGGCACCATGCCAA--
 A C G T A C G T A C G T A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CACTGTGCCCAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTGCCCAGG---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CACTGTGCCCAGG
--CTGTTCCTGG-
 A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACTGTGCCCAGG
---GGTGCCAAGT
 A G T C C G T A A T G C A G C T T A C G A C G T A C T G A T G C G T A C G T A C C G T A C T A G A T C G
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T