Information for 11-GTAACAATCA (Motif 23)

A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A A C G T A C G T A C T G A C G T A C G T C G T A A T G C
p-value:1e-5
log p-value:-1.171e+01
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif22.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.0 +/- 25.6bp
Average Position of motif in Background47.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GTAACAATCA
-NAACAAT--
 A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GTAACAATCA---
NNNTAACAATTATAN
 A C G T A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GTAACAATCA-
---CCAATCAA
 A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTAACAATCA
--AACAAT--
 A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTAACAATCA
GTAAACAAT--
 A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTAACAATCA--
CCATCAATCAAA
 A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTAACAATCA
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTAACAATCA----
AATGAACAATGGAATT
 A C G T A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTAACAATCA---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTAACAATCA---
TTAAGAACAATAAATT
 A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C G T C A C G T A A G C T A G T C C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T