Information for 8-TCRACGCTSA (Motif 21)

C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
Reverse Opposite:
C G A T A T C G G T C A A C T G T A G C A T C G C G A T A G T C C T A G C G T A
p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.724
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.36%
Number of Background Sequences with motif960.8
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets54.7 +/- 26.5bp
Average Position of motif in Background49.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCRACGCTSA
----NGCTN-
 C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCRACGCTSA--
-AGCCACTCAAG
 C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A A C G T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCRACGCTSA--
AAAATGCTGACT
 C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCRACGCTSA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TCRACGCTSA----
----TGCTGACTCA
 C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCRACGCTSA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCRACGCTSA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TCRACGCTSA
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TCRACGCTSA-
-----GCTGTG
 C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TCRACGCTSA-----
TCGTACCCGCATCATT
 A C G T C G A T A G T C C T A G C G T A A T G C A T C G A G T C A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T