Information for 1-TGGTGGTHTGGAA (Motif 2)

A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
Reverse Opposite:
C G A T A C G T A G T C A T G C C G T A C A T G G T C A A G T C A T G C C T G A A T G C A G T C C G T A
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.4 +/- 23.4bp
Average Position of motif in Background44.3 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGGTGGTHTGGAA-
----GGTCTGGCAT
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGTHTGGAA
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGGTHTGGAA---
NNNTTGGTTTCGNTNNN
 A C G T A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGTGGTHTGGAA---
-TNTGGTTTCGATACN
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A A C G T A C G T A C G T
A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGGTGGTHTGGAA----
--NTGGTTTCGGTTNNN
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGTGGTHTGGAA
-VBSYGTCTGG--
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGGTGGTHTGGAA
-------TTGGCA
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGGTHTGGAA
NNTGTGGTTT----
 A C G T A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGTGGTHTGGAA-
TGATGACGTGGCAN
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGGTGGTHTGGAA
---CTGTCTGG--
 A C G T C T A G A T C G A G C T T A C G C T A G C A G T G A T C A C G T A T C G A C T G G T C A C G T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T