Information for 11-CMRTGGMAGKKGAGGA (Motif 19)

A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A G T C G T C A G T A C A G T C A C G T A C G T A G T C G T A C C G T A A G C T A C T G A C T G
p-value:1e-6
log p-value:-1.531e+01
Information Content per bp:1.869
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 28.5bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA
------CAGGTGAGG-
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA
---TGGCAGTTGN---
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA---
---------GGGAGGACNG
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA
NNNTGGCAGTTGGTNN
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CMRTGGMAGKKGAGGA
---TGGCAGTTGG---
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA-
NNNNAGCAGCTGCTGAN
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA---
---NNTNAGGGGCGGNNNN
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA
-CACGGCAGTTGGTNN
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CMRTGGMAGKKGAGGA--
---GGTCANYTGAGGWCA
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CMRTGGMAGKKGAGGA--
----GGCGGGGGCGGGGG
 A G T C G T A C C T G A A C G T A C T G A C T G G T C A C G T A A C T G C A G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G