Information for 4-TCCATATTAT (Motif 16)

A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
G T C A A C G T G T C A C G T A A C G T G T C A A C G T A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.8 +/- 26.6bp
Average Position of motif in Background46.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCATATTAT
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCATATTAT
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCATATTAT
ACCATATGGT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCATATTAT
-CCATATGT-
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCATATTAT
ACCATATGTT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCATATTAT
ACCATATGTT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCATATTAT
ACCATATGGT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCATATTAT
ANCATATGTT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

OLIG1/MA0826.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCATATTAT
AACATATGTT
 A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCCATATTAT-
CATCCAGATGTTC
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C