Information for 8-CMCMCAGKMRKCACRY (Motif 15)

A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T A C T G A C G T A C T G G T A C A G C T A C G T G T C A A G T C A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.813
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 25.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CMCMCAGKMRKCACRY
--CACAGN--------
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CMCMCAGKMRKCACRY--
----------GCACGTAY
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CMCMCAGKMRKCACRY
ATTTCCCAGVAKSCY---
 A C G T A C G T A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:CMCMCAGKMRKCACRY--
----------GCACGTNC
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CMCMCAGKMRKCACRY-
---------BGCACGTA
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CMCMCAGKMRKCACRY-
-----AGGAAACAGCTG
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.51
Offset:10
Orientation:forward strand
Alignment:CMCMCAGKMRKCACRY----
----------GCACGTACCC
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CMCMCAGKMRKCACRY
CCACACAGCAGGAGA--
 A C G T A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CMCMCAGKMRKCACRY--
-NCTANGTCAGCAAATTT
 A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T A C G T A C G T
A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CMCMCAGKMRKCACRY
AGGAGACCCCCAATTTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G T C A A G T C C G T A C T A G A C G T G T C A C T G A A C T G A G T C C G T A A G T C C T G A A G C T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G A C G T A C G T A C G T A C G T A C G T