p-value: | 1e-7 |
log p-value: | -1.739e+01 |
Information Content per bp: | 1.871 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 1.16% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 68.3 +/- 21.6bp |
Average Position of motif in Background | 92.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTGCACCCTGCTGTCC ---CCCCCTGCTGTG- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGCACCCTGCTGTCC -GGCCYCCTGCTGDGH |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GTGCACCCTGCTGTCC ------CCTGCTGAGH |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTGCACCCTGCTGTCC-- ---NNTCCTGCTGTGNNN |
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CTCF/MA0139.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGCACCCTGCTGTCC- TAGCGCCCCCTGGTGGCCA |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GTGCACCCTGCTGTCC CNNBRGCGCCCCCTGSTGGC- |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGCACCCTGCTGTCC- ANAGTGCCACCTGGTGGCCA |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTGCACCCTGCTGTCC-- ---TNTCCTGCTGTGNNG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTGCACCCTGCTGTCC-- ---TCNCCTGCTGNGNNN |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGCACCCTGCTGTCC -GACCCCCCGCTGTG- |
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