Information for 5-GGMAKAKTGTRMSGRR (Motif 12)

A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
Reverse Opposite:
G A T C A G T C A G T C T A C G A C G T A G T C C G T A A G T C C G T A T G A C A C G T G T C A A C G T A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.800
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGMAKAKTGTRMSGRR
--AAAATTGTTATGAA
 A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGMAKAKTGTRMSGRR
YDGHTACAWTGTADC---
 A C G T A C G T A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGMAKAKTGTRMSGRR
TWGHWACAWTGTWDC---
 A C G T A C G T A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGMAKAKTGTRMSGRR
GGAAAAATTGTTAGGAA
 A C G T A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGMAKAKTGTRMSGRR
--CTCATTGTC-----
 A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGMAKAKTGTRMSGRR
-----ATTGTT-----
 A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGMAKAKTGTRMSGRR
-----ATTGTTA----
 A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGMAKAKTGTRMSGRR
TGGAAAA----------
 A C G T A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGMAKAKTGTRMSGRR-
CNNNTATTGTTCNNNNN
 A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GGMAKAKTGTRMSGRR
NNTGGAAANN---------
 A C G T A C G T A C G T A C T G A C T G G T C A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T C A A T G C C T A G C T A G C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T