Information for 6-GAAGTGTCGA (Motif 5)

A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 30.9bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GAAGTGTCGA---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAAGTGTCGA
AGAGGAAGTG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGTCGA
NTCAAGTGG---
 A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAAGTGTCGA
AGCGGAAGTG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAAGTGTCGA
ACAGGAAGTG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAAGTGTCGA
AAAGRGGAAGTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGTCGA
NTCAAGTGGN--
 A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGTCGA
TTRAGTGSYK-
 A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTGTCGA
TTAAGTGGN--
 A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGTGTCGA
-AGGTGTCA-
 A C T G C G T A C G T A A C T G A C G T A C T G A C G T A G T C A C T G C G T A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T