Information for 6-CCCAGTCTCCTGTTTC (Motif 3)

G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
Reverse Opposite:
A C T G C T G A C G T A C T G A G T A C C G T A C T A G A C T G C G T A C T A G C T G A A G T C A C G T A C T G A T C G A C T G
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.788
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.3 +/- 25.9bp
Average Position of motif in Background55.9 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCCAGTCTCCTGTTTC
----GKMTCADRTTWC
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCAGTCTCCTGTTTC
-TCAGTTTCATTTTCC
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCCAGTCTCCTGTTTC
----ATTTCCTGTN--
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCAGTCTCCTGTTTC
--CAGTTTCGNTTCTN
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCCAGTCTCCTGTTTC
----ACTTCCTGTT--
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCAGTCTCCTGTTTC
----GKVTCADRTTWC
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCCAGTCTCCTGTTTC
---AGTTTCAKTTTC-
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCCAGTCTCCTGTTTC--
-------TCCTGTTTACA
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCCAGTCTCCTGTTTC-
-------TKCTGTTCCA
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCCAGTCTCCTGTTTC
----ACATCCTGNT--
 G T A C A T G C G T A C C G T A C T A G A G C T A G T C A C G T G T A C A G T C A C G T A C T G A G C T A C G T A G C T G T A C
A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T