p-value: | 1e-41 |
log p-value: | -9.457e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 13.68% |
Number of Background Sequences with motif | 73.9 |
Percentage of Background Sequences with motif | 0.16% |
Average Position of motif in Targets | 43.7 +/- 23.9bp |
Average Position of motif in Background | 55.9 +/- 32.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.27 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0065.1_Hoxc10/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCGTAAAGCG- TAAAGTCGTAAAACGT |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCGTAAAGCG -NGYCATAAAWCH |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCGTAAAGCG- TAAAGTCGTAAAATAG |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCGTAAAGCG- TAAAGTCGTAAAACAT |
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HOXC12/MA0906.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCGTAAAGCG -GGTCGTAAAAA- |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCGTAAAGCG -AGTCGTAAAAA- |
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HOXC11/MA0651.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCGTAAAGCG -GGTCGTAAAAT- |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCGTAAAGCG-- CAAGGTCGTAAAATCTT |
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HOXD11/MA0908.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGCCGTAAAGCG --GTCGTAAAAA- |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCGTAAAGCG-- TAAGGTCGTAAAATCCT |
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