Information for 9-CCAAGATGGC (Motif 9)

A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C
Reverse Opposite:
A C T G A G T C A T G C C G T A A C G T A T G C A C G T A C G T A C T G A C T G
p-value:1e-12
log p-value:-2.884e+01
Information Content per bp:1.935
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif104.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets48.2 +/- 31.0bp
Average Position of motif in Background52.9 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGC---
-CAAGATGGCGGC
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGC---
-CAAGATGGCGGC
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCAAGATGGC----
---TAATGGCGGNC
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAAGATGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAGATGGC
AACAGATGGC
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGATGGC
TGCCAA------
 A C G T A C G T A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAAGATGGC
CGTGCCAAG-----
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAAGATGGC
GGTGCCAAGT----
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGATGGC----
CTAATATTGCTAAA
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGATGGC----
CTAATATTGCTAAA
 A G T C G T A C C G T A C G T A A T C G C G T A A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A