Information for 3-RTKTCWKAAGCAK (Motif 8)

C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G G T A C A C G T A C G T G T A C C G A T A C T G C G T A G T C A C G T A G A C T
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.0 +/- 27.2bp
Average Position of motif in Background49.4 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RTKTCWKAAGCAK
ANTTCTNNAGAA-
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RTKTCWKAAGCAK
ATTGCACAATA--
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RTKTCWKAAGCAK-----
-TNNATTATGCATANNTT
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RTKTCWKAAGCAK--
ANTTCTCAGGAANNN
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RTKTCWKAAGCAK
--TTCCKNAGAA-
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RTKTCWKAAGCAK
VTTRCATAAY---
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RTKTCWKAAGCAK
NTGTCAN------
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:RTKTCWKAAGCAK
-----NGAAGC--
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RTKTCWKAAGCAK
ANGTTACATAA----
 A C G T A C G T C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RTKTCWKAAGCAK
ATTGCATAA----
 C T A G A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C G T
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T