Information for 24-CTTTCGTATTCTC (Motif 26)

A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C T G C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.181e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 11.8bp
Average Position of motif in Background66.0 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTCGTATTCTC--
TNNTTTCGTATTNNANN
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCGTATTCTC
RSTTTCRSTTTC--
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCGTATTCTC
ACTTTCACTTTC--
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCGTATTCTC
ANTTTCGCTTTCGN
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTTCGTATTCTC
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCGTATTCTC---
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTCGTATTCTC
ACTTTCGTTTCT--
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCGTATTCTC
ASTTTCASTTYC--
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTTCGTATTCTC
AGTTTCAGTTTC--
 A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTTTCGTATTCTC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T