Information for 13-GAAAMTTTCA (Motif 20)

A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
Reverse Opposite:
C G A T A C T G G T C A C G T A C G T A C A T G A C G T A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.842
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif211.9
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets56.8 +/- 32.6bp
Average Position of motif in Background51.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAAAMTTTCA---
GAAAAAATTGCAAGG
 A C G T A C G T A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAAAMTTTCA-----
---ACTTTCACTTTC
 A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAMTTTCA
GGAAATTCCC
 A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAAMTTTCA--
--TGGTTTCAGT
 A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAMTTTCA
CCAACTGCCA
 A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAAMTTTCA------
-TCACTTTCACTTTCN
 A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAAAMTTTCA
AATGGAAAAT----
 A C G T A C G T A C G T A C G T A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAMTTTCA
AATGGAAAAT----
 A C G T A C G T A C G T A C G T A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAMTTTCA
NATGGAAAAN----
 A C G T A C G T A C G T A C G T A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAMTTTCA
NNTGGAAANN----
 A C G T A C G T A C G T A C G T A C T G T G C A C G T A C G T A G T A C A C G T A C G T A C G T A G T C G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T