Information for 12-CAGCAGCCYTCAC (Motif 17)

A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
Reverse Opposite:
A C T G G A C T A C T G C T G A C T G A A C T G A C T G A T G C C G A T A C T G A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.855
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.6 +/- 18.0bp
Average Position of motif in Background36.2 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCCYTCAC
AGCAGCTGCTNN---
 A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGCAGCCYTCAC-
CCCCCGCCCCCGCC
 A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCAGCCYTCAC---
--TCCGCCCCCGCATT
 A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCCYTCAC
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCCYTCAC
CAGCTGNT-----
 A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCAGCCYTCAC
TGAGTCAGCA--------
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCCYTCAC
AGCAGCTGCT-----
 A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGCCYTCAC
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGCCYTCAC
ATGTACAGTAGCAAAG--
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGCCYTCAC
NCAGCTGCTG----
 A C G T A G T C C T G A A C T G A G T C C G T A A T C G A G T C A G T C A G C T A G C T A G T C C T G A G T A C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T