Information for 5-GTAACTHAAAATGTCA (Motif 16)

A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
Reverse Opposite:
A C G T C A T G C G T A A G T C C G T A G C A T A G C T A C G T C G A T C A T G C G T A A C T G A C G T A C G T C G T A A T G C
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 14.7bp
Average Position of motif in Background81.0 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTAACTHAAAATGTCA
GWAAYHTGAKMC----
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GTAACTHAAAATGTCA
CCTTAGTTAACTAAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTAACTHAAAATGTCA
GTTAACTAGN-------
 A C G T A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GTAACTHAAAATGTCA
ACTTAGTTAACTAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTAACTHAAAATGTCA
NNNGTAACTANGNNA----
 A C G T A C G T A C G T A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTAACTHAAAATGTCA
GAAACTGAAACT----
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTAACTHAAAATGTCA
GAAAGTGAAAGT----
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTAACTHAAAATGTCA
GAAAMTGAAACT----
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GTAACTHAAAATGTCA-
--------AAAAGTCAA
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTAACTHAAAATGTCA
GRAASTGAAAST----
 A T C G A C G T C G T A C G T A A G T C A C G T G A T C C G T A C G T A C T G A C G T A C G A T C T A G G A C T G T A C C G T A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T