Information for 16-CGAATATATTCGA (Motif 25)

A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A
Reverse Opposite:
G C A T A G T C A T C G C G T A C G T A A C G T C T G A A C G T C G T A A C G T A C G T A G T C C T A G
p-value:1e-4
log p-value:-1.067e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 22.2bp
Average Position of motif in Background46.4 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGAATATATTCGA-
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGAATATATTCGA-
TAAGATTATAATACGG
 A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGAATATATTCGA
GGACTGAATTCATGCC-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGAATATATTCGA-
TTTAATTATAATTAAG
 A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGAATATATTCGA-
NANTTATATATAANGN
 A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGAATATATTCGA
ATGMATATDC----
 A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGAATATATTCGA-
NANTATTATAATTNNN
 A C G T A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGAATATATTCGA-
-GAACGTTCTAGAA
 A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGAATATATTCGA-
-GAANNTTCTAGAA
 A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

DUXA/MA0884.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CGAATATATTCGA
NTGATTAAATTAN-
 A C G T A G T C A C T G C G T A G T C A A C G T C G T A A G C T C G T A A C G T A C G T A T G C C T A G C G T A
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T